IPython Notebook Routines¶

API Reference¶

csxtools.ipynb.image_stack_to_movie(images, frames=None, vmin=None, vmax=None, figsize=(6, 5), cmap='CMRmap', fps=10)[source]¶

Convert image stack to movie and show in notebook.

Parameters:	images (array_like) – Stack of images to show as a movie of shape (N, y, x). frames (int) – Number of frames to process vmin (number) – Minimum value to display for imshow vmax (number) – Maximum value to display for imshow figsize (tuple) – Figure size for each frame cmap (string) – Colormap to use for plotting image fps (int) – Framerate for created movie

csxtools.ipynb.show_image_stack(images, minmax, fontsize=18, cmap='CMRmap', zlabel='Intensty [ADU]', figsize=(12, 10))[source]¶

Show an Interactive Image Stack in an IPython Notebook

Parameters:	images (array_like) – Stack of images of shape (N, y, x) where N is the number of images to show. minmax (tuple) – Value for the minimum and maximum of the stack in the form (min, max) fontsize (int) – Fontsize for axis labels. cmap (string) – Colormap to use for image (from matplotlib) zlabel (string) – Axis label for the color bar (z-axis) figsize (tuple) – Figure size (from matplotlib)